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survcomp : an R/Bioconductor package for performance assessment and comparison of survival models

Markus Schröder, Aedín C. Culhane, John Quackenbush, Benjamin Haibe‐Kains

📄 Abstract

Abstract Summary: The survcomp package provides functions to assess and statistically compare the performance of survival/risk prediction models. It implements state-of-the-art statistics to (i) measure the performance of risk prediction models; (ii) combine these statistical estimates from multiple datasets using a meta-analytical framework; and (iii) statistically compare the performance of competitive models. Availability: The R/Bioconductor package survcomp is provided open source under the Artistic-2.0 License with a user manual containing installation, operating instructions and use case scenarios on real datasets. survcomp requires R version 2.13.0 or higher. http://bioconductor.org/packages/release/bioc/html/survcomp.html Contact: bhaibeka@jimmy.harvard.edu; mschroed@jimmy.harvard.edu Supplementary Information: Supplementary data are available at Bioinformatics online.

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